STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3Z9P5_LOTGIUncharacterized protein. (1813 aa)    
Predicted Functional Partners:
V3ZX92_LOTGI
Uncharacterized protein.
   
 0.648
V4AGY7_LOTGI
SEA domain-containing protein.
   
 0.636
V3ZD26_LOTGI
HORMA domain-containing protein.
   
 0.627
V3ZMC6_LOTGI
Uncharacterized protein.
    
 0.595
V4AKA5_LOTGI
Uncharacterized protein.
    
 0.566
V3ZQB0_LOTGI
CPSF_A domain-containing protein.
   
 0.554
V3Z331_LOTGI
TFIID_20kDa domain-containing protein.
   
 0.542
V4B3H1_LOTGI
Uncharacterized protein.
    
 0.541
V4BRI6_LOTGI
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.540
V3ZMW2_LOTGI
TPR_REGION domain-containing protein.
   
 0.531
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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