STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZBM3_LOTGIUncharacterized protein. (534 aa)    
Predicted Functional Partners:
V4AIF0_LOTGI
Uncharacterized protein.
     
 0.489
V3Z7E7_LOTGI
Uncharacterized protein.
   
 
 0.431
V3ZN77_LOTGI
Uncharacterized protein.
     
 0.428
V4B5L0_LOTGI
HECT domain-containing protein.
      
 0.422
V4CPT1_LOTGI
Uncharacterized protein.
  
 
 0.408
B8R5H1_LOTGI
Malate dehydrogenase.
  
    0.403
V3ZJE6_LOTGI
RING-type domain-containing protein.
  
    0.403
V3ZVG2_LOTGI
Urb2 domain-containing protein.
  
    0.403
V4AA40_LOTGI
Uncharacterized protein.
  
    0.403
V4B4U4_LOTGI
Malate dehydrogenase.
  
    0.403
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.