STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZDR3_LOTGISF4 helicase domain-containing protein. (637 aa)    
Predicted Functional Partners:
V3ZV46_LOTGI
Uncharacterized protein.
   
  
 0.680
V4ARN8_LOTGI
POLAc domain-containing protein.
   
  
 0.679
V3ZIY9_LOTGI
RPOL_N domain-containing protein.
   
  
 0.601
V4BFI6_LOTGI
Uncharacterized protein.
      
 0.597
V4BK80_LOTGI
HGTP_anticodon domain-containing protein.
      
 0.597
V3Z5U1_LOTGI
Uncharacterized protein.
      
 0.540
V4ABJ9_LOTGI
RNase H domain-containing protein.
      
 0.540
V4AI59_LOTGI
Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.540
V4AKI8_LOTGI
DUF155 domain-containing protein.
      
 0.540
V4B4I2_LOTGI
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
      
 0.538
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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