STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZFQ6_LOTGIUncharacterized protein. (434 aa)    
Predicted Functional Partners:
V4BHZ2_LOTGI
Uncharacterized protein.
   
 0.757
V4B658_LOTGI
Uncharacterized protein.
    
 0.539
V4BBU2_LOTGI
Ig-like domain-containing protein.
    
 0.539
V4A753_LOTGI
Uncharacterized protein.
   
 0.533
V4AR65_LOTGI
Uncharacterized protein.
   
 0.533
V4AXJ6_LOTGI
Uncharacterized protein.
   
 0.533
V4ASY2_LOTGI
Uncharacterized protein.
  
 
  0.498
V3YYT5_LOTGI
Ig-like domain-containing protein.
    
  0.478
V3ZKE2_LOTGI
Uncharacterized protein.
    
  0.478
V3ZKF0_LOTGI
I-set domain-containing protein.
    
  0.478
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.