STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZGV7_LOTGITr-type G domain-containing protein. (606 aa)    
Predicted Functional Partners:
V4AEK8_LOTGI
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.991
V4AJS1_LOTGI
KH type-2 domain-containing protein.
   
 
 0.962
V4CLT1_LOTGI
Ribosomal_L18_c domain-containing protein.
   
 
 0.938
V4B9C1_LOTGI
Uncharacterized protein.
  
 
 0.934
V4ANP6_LOTGI
Ribosomal_L2_C domain-containing protein.
   
 0.931
V4CNH2_LOTGI
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.931
V4A128_LOTGI
Ribosomal_L23eN domain-containing protein.
   
 
 0.928
V4B3X6_LOTGI
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.923
V4BKC9_LOTGI
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
  
 0.923
V4A4J2_LOTGI
Ribos_L4_asso_C domain-containing protein.
   
 0.922
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.