STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZHQ2_LOTGITauD domain-containing protein. (331 aa)    
Predicted Functional Partners:
V4ADQ9_LOTGI
Uncharacterized protein.
  
 0.606
V4AIM1_LOTGI
Flavin_Reduct domain-containing protein.
  
 0.598
V4AJ14_LOTGI
HATPase_c domain-containing protein.
  
 0.598
V4B3N8_LOTGI
Uncharacterized protein.
  
 0.598
V4CMR5_LOTGI
Uncharacterized protein.
  
 0.598
V4B4K7_LOTGI
Uncharacterized protein.
  
 0.562
V4A5D4_LOTGI
ANK_REP_REGION domain-containing protein.
  
 
 0.551
V4C658_LOTGI
Uncharacterized protein.
    
 
 0.550
V4A344_LOTGI
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.549
V3ZMG1_LOTGI
HATPase_c domain-containing protein.
  
 0.543
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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