STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZII9_LOTGIPRELI/MSF1 domain-containing protein. (191 aa)    
Predicted Functional Partners:
V4AEJ8_LOTGI
Uncharacterized protein.
    
 0.987
V4AE03_LOTGI
PRELI/MSF1 domain-containing protein.
  
 
0.887
V4BE23_LOTGI
Josephin domain-containing protein.
      
 0.670
V3ZG86_LOTGI
Uncharacterized protein.
      
 0.617
V4AZD6_LOTGI
Protein-serine/threonine kinase.
      
 0.545
V4A303_LOTGI
Uncharacterized protein.
      
 0.541
V4A707_LOTGI
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.
      
 0.532
V3ZY65_LOTGI
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
      
 0.531
V4AM02_LOTGI
RNase III domain-containing protein.
   
  
 0.481
V4B0L1_LOTGI
Glutaredoxin domain-containing protein.
      
 0.453
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.