STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZJK8_LOTGIUncharacterized protein. (182 aa)    
Predicted Functional Partners:
V4A5L4_LOTGI
CMP/dCMP-type deaminase domain-containing protein.
   
 0.841
V4BDT9_LOTGI
Thymidylat_synt domain-containing protein.
  
 
 0.650
V3ZGE8_LOTGI
Uncharacterized protein.
   
 0.580
V3ZR47_LOTGI
Thymidine kinase.
    
 0.552
V4B9C1_LOTGI
Uncharacterized protein.
  
  
 0.473
V4C5U9_LOTGI
Endo/exonuclease/phosphatase domain-containing protein.
   
 
 0.472
V4A5I4_LOTGI
VOC domain-containing protein.
   
 
 0.450
V4AV78_LOTGI
Uncharacterized protein.
   
 
 0.450
V4B256_LOTGI
VOC domain-containing protein.
   
 
 0.450
V4BXG0_LOTGI
Uncharacterized protein.
     
 0.436
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.