STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZJV6_LOTGIUncharacterized protein. (637 aa)    
Predicted Functional Partners:
V3ZS75_LOTGI
Uncharacterized protein.
  
 0.994
V4AEG2_LOTGI
Cnd1 domain-containing protein.
  
 0.994
V4B1T6_LOTGI
Structural maintenance of chromosomes protein.
   
 0.992
V4B263_LOTGI
SMC hinge domain-containing protein.
   
 0.989
V4AFJ6_LOTGI
SMC hinge domain-containing protein.
   
 0.749
V4ASX3_LOTGI
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
  
 0.749
V3ZYT8_LOTGI
SMC_N domain-containing protein.
   
 0.726
V4CJ70_LOTGI
Uncharacterized protein.
   
 0.699
V4B542_LOTGI
SMC_N domain-containing protein.
   
 0.697
V3ZUE7_LOTGI
Uncharacterized protein.
   
 
 0.696
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.