STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZK43_LOTGIUncharacterized protein. (214 aa)    
Predicted Functional Partners:
V3ZWK7_LOTGI
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.814
V4CLP6_LOTGI
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.805
V4AHI1_LOTGI
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.797
V4AIW5_LOTGI
Uncharacterized protein.
    
 0.792
V3ZPA8_LOTGI
Uncharacterized protein.
    
 0.791
V4BHK6_LOTGI
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.780
V4B697_LOTGI
Uso1_p115_head domain-containing protein.
   
 0.751
V3YZ72_LOTGI
Lebercilin domain-containing protein.
    
 0.714
V3ZTE0_LOTGI
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.714
V4AVH3_LOTGI
Uncharacterized protein.
  
 0.709
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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