STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZKJ8_LOTGISuf domain-containing protein. (710 aa)    
Predicted Functional Partners:
V4A3U1_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.998
V4AFS8_LOTGI
Fip1 domain-containing protein.
   
 0.998
V4AUY5_LOTGI
Triosephosphate isomerase.
  
 0.993
V3ZQB0_LOTGI
CPSF_A domain-containing protein.
   
 0.988
V4BJZ7_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
 0.984
V4BAE4_LOTGI
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.983
V4APB2_LOTGI
Uncharacterized protein.
   
 0.977
V4B2V0_LOTGI
CID domain-containing protein.
    
 0.963
V4BF00_LOTGI
Uncharacterized protein.
    
 0.963
V4AJ75_LOTGI
Uncharacterized protein.
    
 0.961
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.