STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZKL3_LOTGIUncharacterized protein. (1838 aa)    
Predicted Functional Partners:
V4AKZ8_LOTGI
Protein kinase domain-containing protein.
   
 0.997
V4AIJ2_LOTGI
Uncharacterized protein.
    
 0.986
V3ZHC5_LOTGI
Uncharacterized protein.
    
 
 0.869
V4B6M8_LOTGI
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 
 0.826
V4ADC4_LOTGI
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 
 0.786
V4B5G9_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.786
V4BVR1_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.786
V3ZIP6_LOTGI
Uncharacterized protein.
    
 
 0.692
V4BDR8_LOTGI
Uncharacterized protein.
    
 
 0.692
V3ZQS6_LOTGI
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
  
 0.686
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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