STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZLX0_LOTGIBZIP domain-containing protein. (100 aa)    
Predicted Functional Partners:
V4AMH2_LOTGI
BZIP domain-containing protein.
  
 
 0.644
V4AXN1_LOTGI
Uncharacterized protein.
   
 
 0.530
V3ZWV1_LOTGI
Uncharacterized protein.
    
 
 0.491
V4BAJ3_LOTGI
Uncharacterized protein.
   
 
 0.478
V3ZYG3_LOTGI
Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.
   
  
 0.471
V3ZAV5_LOTGI
KxDL domain-containing protein.
    
 
 0.460
V3ZPX5_LOTGI
Uncharacterized protein.
    
 
 0.447
V4B2J5_LOTGI
Uncharacterized protein.
    
 
 0.446
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.