STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZNZ7_LOTGIUncharacterized protein. (111 aa)    
Predicted Functional Partners:
LgiFoxA
Forkhead box A protein.
    
 0.680
V4BC00_LOTGI
BHLH domain-containing protein.
   
 0.612
V3ZPE0_LOTGI
Runt domain-containing protein.
    
 0.599
V4AJQ2_LOTGI
Uncharacterized protein.
    
 0.588
V4B2I5_LOTGI
LID domain-containing protein.
    
 0.562
V4AUA0_LOTGI
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.556
V3ZW90_LOTGI
Uncharacterized protein.
  
  
0.507
V4AIS9_LOTGI
Histone H2A; Belongs to the histone H2A family.
    
 0.493
V4CJZ8_LOTGI
Uncharacterized protein.
    
 0.480
V4BY31_LOTGI
BHLH domain-containing protein.
   
 0.476
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.