STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZPP4_LOTGIUncharacterized protein. (307 aa)    
Predicted Functional Partners:
V3Z8K3_LOTGI
Probable methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).
 
 0.999
V3ZQQ8_LOTGI
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
 
  
 0.996
V4BUA6_LOTGI
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
 
  
 0.965
V3ZZN9_LOTGI
Aldolase_II domain-containing protein.
  
 
 0.892
V4ATZ2_LOTGI
UBA domain-containing protein.
     
 0.747
V4AWT4_LOTGI
6PF2K domain-containing protein.
     
 0.747
V3ZKJ8_LOTGI
Suf domain-containing protein.
     
 0.718
V4C730_LOTGI
Uncharacterized protein.
      
 0.596
V4AAF0_LOTGI
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
    
 
 0.559
V4BJX4_LOTGI
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
    
 
 0.559
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.