STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZR45_LOTGIUncharacterized protein. (459 aa)    
Predicted Functional Partners:
V3ZGS7_LOTGI
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.
      
 0.671
V4BFI6_LOTGI
Uncharacterized protein.
   
 
 0.594
V3ZPE0_LOTGI
Runt domain-containing protein.
   
 0.587
V3ZVI2_LOTGI
Uncharacterized protein.
      
 0.540
V4B5Y1_LOTGI
MADS-box domain-containing protein.
    
 0.411
V4ABG8_LOTGI
BHLH domain-containing protein.
     
 0.408
V4A7I3_LOTGI
Nrf1_DNA-bind domain-containing protein.
     
 0.405
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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