STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZSA9_LOTGIUncharacterized protein. (399 aa)    
Predicted Functional Partners:
V4AKB1_LOTGI
Uncharacterized protein.
    
 0.990
V3ZYL0_LOTGI
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
 0.988
V4A2T2_LOTGI
WH2 domain-containing protein.
    
 0.952
V4A7H0_LOTGI
Uncharacterized protein.
    
 0.952
V4AE96_LOTGI
Uncharacterized protein.
    
 0.952
V4BFP6_LOTGI
Uncharacterized protein.
    
 0.952
V4A6B5_LOTGI
Uncharacterized protein.
    
 0.904
V3ZUP3_LOTGI
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
    
 0.875
V3ZHJ6_LOTGI
Uncharacterized protein.
   
 0.869
V4B0W0_LOTGI
Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
   
 
 0.851
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.