STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZSL0_LOTGIUncharacterized protein. (338 aa)    
Predicted Functional Partners:
V4C0V3_LOTGI
Inositol-1-monophosphatase.
    
 0.926
V4A213_LOTGI
Uncharacterized protein.
   
 
 0.923
V4AMU7_LOTGI
GFO_IDH_MocA domain-containing protein.
  
  
 
0.911
V3Z1X8_LOTGI
Uncharacterized protein.
  
  
 
0.907
V4CG04_LOTGI
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
  
 
  0.903
V4AN00_LOTGI
AA_TRNA_LIGASE_II domain-containing protein.
  
    0.549
V4A5P0_LOTGI
GHMP_kinases_C domain-containing protein.
  
 
 0.530
V4A9N7_LOTGI
Uncharacterized protein.
  
 
 0.530
V4AGJ1_LOTGI
Uncharacterized protein.
  
 
 0.530
V4CGJ0_LOTGI
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
   
 
 0.471
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.