STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZT72_LOTGIBrix domain-containing protein. (477 aa)    
Predicted Functional Partners:
V4AN25_LOTGI
SURF6 domain-containing protein.
   
 
 0.994
V4ABI4_LOTGI
Uncharacterized protein.
   
 
 0.987
V4AY99_LOTGI
Uncharacterized protein.
   
   0.986
V4C9E0_LOTGI
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
   0.981
V4AM05_LOTGI
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.979
V4CEN9_LOTGI
Uncharacterized protein.
   
   0.979
V3ZMJ7_LOTGI
Brix domain-containing protein.
   
 
 0.978
V4B3P0_LOTGI
Uncharacterized protein.
   
 
 0.975
V4CH49_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
    0.974
V3ZNK9_LOTGI
Uncharacterized protein.
   
   0.970
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.