STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZTE0_LOTGITrafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)    
Predicted Functional Partners:
V4AHI1_LOTGI
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
V4BHK6_LOTGI
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.999
V4CLP6_LOTGI
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
V3ZPA8_LOTGI
Uncharacterized protein.
   
 0.998
V4AIW5_LOTGI
Uncharacterized protein.
    
 0.998
V4A6W8_LOTGI
Uncharacterized protein.
   
 0.987
V4AAZ2_LOTGI
Uncharacterized protein.
    
 0.985
V3ZRV9_LOTGI
Uncharacterized protein.
    
 0.980
V3ZDW7_LOTGI
Uncharacterized protein.
    
 0.976
V4BL41_LOTGI
Uncharacterized protein.
    
 0.976
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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