STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZVT1_LOTGICytochrome b5 heme-binding domain-containing protein. (445 aa)    
Predicted Functional Partners:
V4BE20_LOTGI
Uncharacterized protein.
     
 0.991
V4A9Z3_LOTGI
Uncharacterized protein.
    
 0.969
V4ARH9_LOTGI
Uncharacterized protein.
    
 0.969
V4BFJ4_LOTGI
Uncharacterized protein.
    
 0.969
V3ZE68_LOTGI
Lactamase_B domain-containing protein.
   
 
 0.968
V4AU45_LOTGI
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
 
 
  
 0.966
V4BHC8_LOTGI
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
  
 
 0.936
V4B1A7_LOTGI
Uncharacterized protein.
   
 0.751
V4C6F1_LOTGI
Rieske domain-containing protein.
   
 0.751
V3ZEX9_LOTGI
Pyr_redox_2 domain-containing protein.
   
 0.745
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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