STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZW83_LOTGIBTB domain-containing protein. (635 aa)    
Predicted Functional Partners:
V3ZM05_LOTGI
Uncharacterized protein.
    
   0.915
V3ZPC9_LOTGI
Uncharacterized protein.
    
   0.915
V3ZTQ5_LOTGI
UBX domain-containing protein.
    
   0.915
V4B0P9_LOTGI
Uncharacterized protein.
   
 
 0.581
V4A4N9_LOTGI
MRP-L46 domain-containing protein.
   
 
 0.580
V4A833_LOTGI
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.580
V3ZPA6_LOTGI
Uncharacterized protein.
   
 
 0.573
V4AB73_LOTGI
Uncharacterized protein.
   
 
 0.573
V3ZF77_LOTGI
Uncharacterized protein.
   
 
 0.570
V4A927_LOTGI
L51_S25_CI-B8 domain-containing protein.
   
   0.565
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.