STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZWJ1_LOTGIPDZ domain-containing protein. (86 aa)    
Predicted Functional Partners:
V4ADX9_LOTGI
APC_N_CC domain-containing protein.
   
 
 0.573
V4A1F1_LOTGI
Uncharacterized protein.
    
 0.538
V3Z8B9_LOTGI
Uncharacterized protein.
    
 
 0.493
V3ZRZ6_LOTGI
Uncharacterized protein.
    
 
 0.493
V4AJX4_LOTGI
Uncharacterized protein.
    
 
 0.468
V3ZMI5_LOTGI
Uncharacterized protein.
    
  0.442
V3ZZ68_LOTGI
Uncharacterized protein.
    
  0.436
V4BHZ2_LOTGI
Uncharacterized protein.
    
  0.428
V4BNX0_LOTGI
WW domain-containing protein.
    
 
 0.421
V4A1H5_LOTGI
Mitogen-activated protein kinase.
    
 0.411
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.