STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZXG7_LOTGIUncharacterized protein. (370 aa)    
Predicted Functional Partners:
V4ARF4_LOTGI
Uncharacterized protein.
   
 0.969
V4ANX3_LOTGI
LIM domain-containing protein.
   
 0.967
V3ZCH7_LOTGI
Uncharacterized protein.
   
 0.956
V4AZL3_LOTGI
ANK_REP_REGION domain-containing protein.
   
 0.956
V3ZY71_LOTGI
Uncharacterized protein.
   
 0.895
V4AY03_LOTGI
Protein kinase domain-containing protein.
     
 0.835
V4A075_LOTGI
Uncharacterized protein.
    
 0.816
V4A7A1_LOTGI
ATP-dependent Clp protease proteolytic subunit.
 
      0.760
V3ZNR3_LOTGI
Calponin-homology (CH) domain-containing protein.
     
 0.749
V3ZQ63_LOTGI
Uncharacterized protein.
     
 0.749
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.