Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V3Z4Y4_LOTGI | V3ZF12_LOTGI | V3Z4Y4 | V3ZF12 | RNA helicase. | Brix domain-containing protein. | 0.992 |
V3Z4Y4_LOTGI | V3ZY65_LOTGI | V3Z4Y4 | V3ZY65 | RNA helicase. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
V3Z4Y4_LOTGI | V3ZY85_LOTGI | V3Z4Y4 | V3ZY85 | RNA helicase. | Peptidase_M24 domain-containing protein. | 0.936 |
V3Z4Y4_LOTGI | V3ZZQ9_LOTGI | V3Z4Y4 | V3ZZQ9 | RNA helicase. | Uncharacterized protein. | 0.990 |
V3Z4Y4_LOTGI | V4A581_LOTGI | V3Z4Y4 | V4A581 | RNA helicase. | RRM domain-containing protein. | 0.998 |
V3Z4Y4_LOTGI | V4A9E4_LOTGI | V3Z4Y4 | V4A9E4 | RNA helicase. | TRASH domain-containing protein. | 0.970 |
V3Z4Y4_LOTGI | V4AM05_LOTGI | V3Z4Y4 | V4AM05 | RNA helicase. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.998 |
V3Z4Y4_LOTGI | V4AMH1_LOTGI | V3Z4Y4 | V4AMH1 | RNA helicase. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.984 |
V3Z4Y4_LOTGI | V4B616_LOTGI | V3Z4Y4 | V4B616 | RNA helicase. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.591 |
V3Z4Y4_LOTGI | V4C0F3_LOTGI | V3Z4Y4 | V4C0F3 | RNA helicase. | Brix domain-containing protein. | 0.991 |
V3ZF12_LOTGI | V3Z4Y4_LOTGI | V3ZF12 | V3Z4Y4 | Brix domain-containing protein. | RNA helicase. | 0.992 |
V3ZF12_LOTGI | V3ZY65_LOTGI | V3ZF12 | V3ZY65 | Brix domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
V3ZF12_LOTGI | V3ZY85_LOTGI | V3ZF12 | V3ZY85 | Brix domain-containing protein. | Peptidase_M24 domain-containing protein. | 0.982 |
V3ZF12_LOTGI | V3ZZQ9_LOTGI | V3ZF12 | V3ZZQ9 | Brix domain-containing protein. | Uncharacterized protein. | 0.991 |
V3ZF12_LOTGI | V4A581_LOTGI | V3ZF12 | V4A581 | Brix domain-containing protein. | RRM domain-containing protein. | 0.998 |
V3ZF12_LOTGI | V4A9E4_LOTGI | V3ZF12 | V4A9E4 | Brix domain-containing protein. | TRASH domain-containing protein. | 0.998 |
V3ZF12_LOTGI | V4AM05_LOTGI | V3ZF12 | V4AM05 | Brix domain-containing protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.991 |
V3ZF12_LOTGI | V4AMH1_LOTGI | V3ZF12 | V4AMH1 | Brix domain-containing protein. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.996 |
V3ZF12_LOTGI | V4B616_LOTGI | V3ZF12 | V4B616 | Brix domain-containing protein. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.988 |
V3ZF12_LOTGI | V4C0F3_LOTGI | V3ZF12 | V4C0F3 | Brix domain-containing protein. | Brix domain-containing protein. | 0.995 |
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