STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZZW4_LOTGIUncharacterized protein. (127 aa)    
Predicted Functional Partners:
V4AD07_LOTGI
Uncharacterized protein.
   
 0.650
V4AKN8_LOTGI
Uncharacterized protein.
   
 0.524
V4A736_LOTGI
WW domain-containing protein.
    
 
 0.494
V4BB29_LOTGI
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.482
V4C410_LOTGI
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.482
V4AJZ3_LOTGI
t-SNARE coiled-coil homology domain-containing protein.
    
 0.477
V4ACD4_LOTGI
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.472
V3ZZ97_LOTGI
Gamma-tubulin complex component.
    
 
 0.465
V4AK68_LOTGI
Uncharacterized protein.
   
 0.458
V3ZR25_LOTGI
Gamma-tubulin complex component.
    
 
 0.457
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.