STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A048_LOTGIUncharacterized protein. (529 aa)    
Predicted Functional Partners:
V4AKY1_LOTGI
Uncharacterized protein.
    
 0.904
V4A4F8_LOTGI
Uncharacterized protein.
    
 0.726
V4ANB5_LOTGI
Uncharacterized protein.
      
 0.669
V3ZFP8_LOTGI
ABC transporter domain-containing protein.
    
 0.652
V4BIN6_LOTGI
AAA domain-containing protein.
      
 0.627
V4CJ52_LOTGI
Aldo_ket_red domain-containing protein.
      
 0.615
V3ZSD4_LOTGI
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
      
 0.589
V4C6Y2_LOTGI
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      
 0.584
V4AW26_LOTGI
Uncharacterized protein.
      
 0.547
V4AHG9_LOTGI
B12-binding domain-containing protein.
      
 0.540
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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