STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A0D2_LOTGIUncharacterized protein. (473 aa)    
Predicted Functional Partners:
V4ADY8_LOTGI
Importin N-terminal domain-containing protein.
   
 0.800
V4AVC2_LOTGI
Uncharacterized protein.
    
 
 0.733
V4AFT1_LOTGI
Tyrosine--tRNA ligase.
   
  
 0.707
V4BHM7_LOTGI
Importin N-terminal domain-containing protein.
   
 
 0.666
V4AG41_LOTGI
MIF4G domain-containing protein.
   
 
 0.616
V4AYM7_LOTGI
Nuclear cap-binding protein subunit 2.
    
 
 0.573
V4ASN2_LOTGI
Guanylate kinase-like domain-containing protein.
    
 
 0.555
V4C582_LOTGI
Guanylate kinase-like domain-containing protein.
    
 
 0.555
V4AFB6_LOTGI
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.550
V4A4Y7_LOTGI
RanBD1 domain-containing protein.
   
 
 0.532
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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