STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A1B0_LOTGIUncharacterized protein. (804 aa)    
Predicted Functional Partners:
V4CB73_LOTGI
Peptidase S1 domain-containing protein.
  
     0.528
V4AU46_LOTGI
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
     0.512
V4B6Q9_LOTGI
EF-hand domain-containing protein.
      
 0.483
V3ZP67_LOTGI
Protein kinase domain-containing protein.
    
  0.482
V3ZTP6_LOTGI
Uncharacterized protein.
    
  0.482
V3ZZ86_LOTGI
Protein kinase domain-containing protein.
    
  0.482
V4A6E3_LOTGI
Protein kinase domain-containing protein.
    
  0.482
V4B8P8_LOTGI
Protein kinase domain-containing protein.
    
  0.482
V4BKV2_LOTGI
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
     0.440
V4A753_LOTGI
Uncharacterized protein.
    
  0.431
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.