STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A1S7_LOTGIUncharacterized protein. (476 aa)    
Predicted Functional Partners:
V4AKZ5_LOTGI
Uncharacterized protein; Belongs to the CGI121/TPRKB family.
    
 0.859
V3ZNT9_LOTGI
YrdC-like domain-containing protein.
  
 
 0.582
V4ALM2_LOTGI
YrdC-like domain-containing protein.
  
 
 0.582
V4B9C1_LOTGI
Uncharacterized protein.
  
 
 0.545
V4B0P7_LOTGI
Ala_racemase_C domain-containing protein.
    
 0.536
V4B029_LOTGI
LMWPc domain-containing protein.
    
  0.515
V4CE00_LOTGI
CTP_transf_like domain-containing protein.
    
 0.420
V4CHG0_LOTGI
Uncharacterized protein.
    
 0.420
V3ZYN3_LOTGI
Uncharacterized protein.
  
  
 0.415
V4AU78_LOTGI
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
  
  
 0.413
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.