STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A2B3_LOTGISynN domain-containing protein. (191 aa)    
Predicted Functional Partners:
V3ZWY4_LOTGI
V-SNARE coiled-coil homology domain-containing protein.
    
 0.995
V4B3C4_LOTGI
V-SNARE coiled-coil homology domain-containing protein.
    
 0.992
V4AES3_LOTGI
V-SNARE coiled-coil homology domain-containing protein.
    
 0.988
V4B6T7_LOTGI
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.967
V3ZKS1_LOTGI
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.961
V4B905_LOTGI
Uncharacterized protein.
    
 0.947
V4BTZ8_LOTGI
RabBD domain-containing protein.
     
 0.932
V4C8D3_LOTGI
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
 
     0.921
V4AF49_LOTGI
Uncharacterized protein.
     
 0.919
V4AYH8_LOTGI
Uncharacterized protein.
     
 0.919
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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