STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A2D5_LOTGIUncharacterized protein. (115 aa)    
Predicted Functional Partners:
V4A1E3_LOTGI
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.998
V4C2F5_LOTGI
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.968
V4B125_LOTGI
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.960
V4BGC2_LOTGI
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.936
V3ZQ42_LOTGI
Uncharacterized protein; Belongs to the DEAD box helicase family.
     
 0.753
V4A3M6_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.694
V4B9A3_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.694
V4AG68_LOTGI
Uncharacterized protein.
     
 0.669
V3ZNK0_LOTGI
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.668
V4BIB8_LOTGI
Peptidylprolyl isomerase.
   
 
 0.662
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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