STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A2L2_LOTGIUncharacterized protein. (832 aa)    
Predicted Functional Partners:
V4C658_LOTGI
Uncharacterized protein.
   
 0.999
V4BKW3_LOTGI
Uncharacterized protein.
   
0.953
V4B0G7_LOTGI
Rho-GAP domain-containing protein.
    
 
 0.909
V4BM87_LOTGI
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.817
V4B7A7_LOTGI
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.816
V4CP44_LOTGI
AP complex subunit beta.
    
  0.806
V3ZNU6_LOTGI
ENTH domain-containing protein.
    
 0.768
V4BSP2_LOTGI
Uncharacterized protein; Belongs to the Stoned B family.
    
 0.703
V4AGT7_LOTGI
Uncharacterized protein.
    
 0.688
V3ZQI1_LOTGI
Uncharacterized protein.
    
 0.674
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.