STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A4C0_LOTGIExonuclease domain-containing protein. (186 aa)    
Predicted Functional Partners:
V3ZS55_LOTGI
Exonuclease domain-containing protein.
   
 0.948
V4AB80_LOTGI
Exonuclease domain-containing protein.
   
 0.948
V4ARX7_LOTGI
Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
     
 0.706
V4BM26_LOTGI
Exonuclease domain-containing protein.
   
 
 0.663
V4B6P7_LOTGI
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
      
 0.596
V4ADS8_LOTGI
Uncharacterized protein.
      
 0.537
V4BLJ2_LOTGI
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
      
 0.533
V3ZMC1_LOTGI
Str_synth domain-containing protein.
      
 0.525
V4AHX5_LOTGI
Str_synth domain-containing protein.
      
 0.525
V4ABJ9_LOTGI
RNase H domain-containing protein.
     
 0.523
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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