STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A4R9_LOTGIAminotran_1_2 domain-containing protein. (484 aa)    
Predicted Functional Partners:
V4ABY1_LOTGI
Aspartate aminotransferase.
   
 
 0.965
V3ZWW0_LOTGI
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.957
V4AIZ3_LOTGI
Aspartate aminotransferase.
   
 0.949
V4ASZ2_LOTGI
Aspartate aminotransferase.
   
 0.949
V3YWW4_LOTGI
Serine--pyruvate aminotransferase.
  
 0.941
V4AV40_LOTGI
N-acetyltransferase domain-containing protein.
  
 
 0.929
V4B7B0_LOTGI
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.924
V4AU38_LOTGI
Aminotran_1_2 domain-containing protein.
  
  
 
0.901
V3ZLV6_LOTGI
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
 0.897
V4AZD1_LOTGI
Uncharacterized protein.
   
 0.868
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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