STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A5S7_LOTGIUncharacterized protein. (840 aa)    
Predicted Functional Partners:
V4AAM8_LOTGI
G-patch domain-containing protein.
 
     0.944
V4AFA5_LOTGI
Uncharacterized protein.
    
 0.806
V4B6F1_LOTGI
Uncharacterized protein.
    
  0.776
V3ZZZ0_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 
 0.754
V4B6K6_LOTGI
PWI domain-containing protein.
     
 0.734
V4AAP7_LOTGI
Uncharacterized protein.
    
  0.728
V4BUA2_LOTGI
Uncharacterized protein.
   
 0.687
V4AAX5_LOTGI
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.674
V3ZXV5_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
  0.668
V4CIC0_LOTGI
MI domain-containing protein.
    
  0.657
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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