STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A6E3_LOTGIProtein kinase domain-containing protein. (292 aa)    
Predicted Functional Partners:
V4AKQ8_LOTGI
UBA domain-containing protein.
    
 0.934
V4B386_LOTGI
Cbl-PTB domain-containing protein.
    
 0.934
V4B8C8_LOTGI
RING-type domain-containing protein.
    
 0.932
V3Z675_LOTGI
Uncharacterized protein.
   
 0.908
V3ZPK8_LOTGI
Uncharacterized protein.
   
 0.908
V3ZQI5_LOTGI
PH domain-containing protein.
    
 0.908
V3ZZ48_LOTGI
SH2 domain-containing protein.
   
 0.908
V4AUH3_LOTGI
Uncharacterized protein.
   
 0.832
V3ZQI1_LOTGI
Uncharacterized protein.
    
 0.830
V4B272_LOTGI
Uncharacterized protein.
 
  
 0.825
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.