STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A6S1_LOTGILipase domain-containing protein. (363 aa)    
Predicted Functional Partners:
V4A8Z7_LOTGI
acidPPc domain-containing protein.
    
  0.903
V3ZJJ3_LOTGI
Hydrolase_4 domain-containing protein.
     
  0.900
V4C8Y2_LOTGI
O-acyltransferase.
     
  0.900
V4ATP5_LOTGI
Lipase domain-containing protein.
  
  
 
0.703
V4BI62_LOTGI
Lipase domain-containing protein.
  
  
 
0.700
V4AP07_LOTGI
Lipase domain-containing protein.
  
  
 
0.685
V4AQM2_LOTGI
Lipase domain-containing protein.
  
  
 
0.683
V4AMQ2_LOTGI
Lipase domain-containing protein.
  
  
 
0.680
V4CML7_LOTGI
Lipase domain-containing protein.
  
  
 
0.678
V4A6S5_LOTGI
PLAT domain-containing protein.
  
  
 
0.670
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.