STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A6T2_LOTGIUncharacterized protein. (202 aa)    
Predicted Functional Partners:
V4A3W1_LOTGI
Uncharacterized protein.
   
 
 0.893
V4B3K0_LOTGI
Uncharacterized protein.
    
 0.831
V4A9V7_LOTGI
RIC1 domain-containing protein.
    
 0.823
V4AUU6_LOTGI
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
0.811
V4AJT6_LOTGI
Vps53_N domain-containing protein.
     
 0.784
V4BFW4_LOTGI
Uncharacterized protein.
   
 0.773
V4CQV4_LOTGI
Uncharacterized protein.
   
 0.773
V4A823_LOTGI
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.766
V3Z6S6_LOTGI
t-SNARE coiled-coil homology domain-containing protein.
    
 0.716
V3ZSC1_LOTGI
Uncharacterized protein.
     
 0.695
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.