STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A6Z8_LOTGICASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family. (222 aa)    
Predicted Functional Partners:
V4A8L9_LOTGI
Uncharacterized protein.
    
 0.907
V4BHZ2_LOTGI
Uncharacterized protein.
    
 0.690
V4AGC3_LOTGI
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.529
V4BEN7_LOTGI
Uncharacterized protein.
   
 0.529
V4CLC6_LOTGI
Uncharacterized protein.
   
 0.529
V3ZHE1_LOTGI
ANK_REP_REGION domain-containing protein.
    
 0.466
V3ZRU8_LOTGI
Uncharacterized protein.
    
 0.466
V3ZWV9_LOTGI
ANK_REP_REGION domain-containing protein.
    
 0.466
V4A1E7_LOTGI
Uncharacterized protein.
    
 0.466
V4AMK7_LOTGI
Uncharacterized protein.
    
 0.466
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.