STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A709_LOTGIPeptidase_S9 domain-containing protein. (714 aa)    
Predicted Functional Partners:
V3ZR90_LOTGI
Signal peptidase complex catalytic subunit SEC11.
   
 
 0.636
V4CP36_LOTGI
Uncharacterized protein.
      
 0.587
V4A753_LOTGI
Uncharacterized protein.
     
 0.567
V4AR65_LOTGI
Uncharacterized protein.
     
 0.567
V4AXJ6_LOTGI
Uncharacterized protein.
     
 0.567
V4AYG5_LOTGI
Uncharacterized protein.
   
 
 0.567
V4AJE4_LOTGI
Ncstrn_small domain-containing protein.
   
  
 0.565
V4CNK7_LOTGI
Uncharacterized protein.
    
   0.499
V3ZDX2_LOTGI
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.469
V3ZUP0_LOTGI
Protein kinase domain-containing protein.
   
 
  0.451
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.