STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A7A8_LOTGIUncharacterized protein. (579 aa)    
Predicted Functional Partners:
V3Z8S4_LOTGI
RBR-type E3 ubiquitin transferase.
    
 0.967
V4AAS8_LOTGI
Protein kinase domain-containing protein.
    
 0.941
V4AJ06_LOTGI
VWFA domain-containing protein.
 
  
   0.850
V4BKW3_LOTGI
Uncharacterized protein.
    
 0.842
V4C541_LOTGI
WD_REPEATS_REGION domain-containing protein.
 
  
 0.827
V4CNT3_LOTGI
Uncharacterized protein.
 
  
 0.821
V4AED3_LOTGI
VWFA domain-containing protein.
 
  
   0.812
V4B754_LOTGI
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.781
V4AYP9_LOTGI
Uncharacterized protein.
    
 0.732
V4AJF7_LOTGI
HAP1 N-terminal domain-containing protein.
    
 0.724
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.