STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A7F3_LOTGIUncharacterized protein. (702 aa)    
Predicted Functional Partners:
V3ZF78_LOTGI
B30.2/SPRY domain-containing protein.
   
 
 0.788
V4BX12_LOTGI
Uncharacterized protein.
    
 
 0.763
V4A5S6_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 
 0.726
V4B4M4_LOTGI
RRM domain-containing protein.
   
 
 0.630
V4CJQ5_LOTGI
Uncharacterized protein.
   
 
 0.630
V4A0N2_LOTGI
Peptidylprolyl isomerase.
     
 0.551
V4A055_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 
 0.549
V4AY11_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 
 0.549
V4B112_LOTGI
Uncharacterized protein.
    
 
 0.549
V4CMR0_LOTGI
RmlD_sub_bind domain-containing protein.
      
 0.541
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.