STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A934_LOTGIUncharacterized protein. (348 aa)    
Predicted Functional Partners:
V3ZJD6_LOTGI
cobW domain-containing protein.
 
      0.802
V4C223_LOTGI
Uncharacterized protein.
   
    0.583
V4AXZ2_LOTGI
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
   
    0.532
V3ZZE4_LOTGI
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
   
    0.527
V3ZLV6_LOTGI
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
    0.523
V4BXA5_LOTGI
Uncharacterized protein.
   
    0.521
V4B1G2_LOTGI
Uncharacterized protein.
      
 0.443
V4AF38_LOTGI
BRCT domain-containing protein.
 
 
    0.432
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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