STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A9D7_LOTGIAmmonium_transp domain-containing protein. (650 aa)    
Predicted Functional Partners:
V4AZ87_LOTGI
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.560
V4B7V8_LOTGI
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
  
 0.430
V4CSK4_LOTGI
Uncharacterized protein; Belongs to the aconitase/IPM isomerase family.
  
  
 0.430
V4B3R1_LOTGI
Glutamine synthetase.
  
  
 0.425
V4BGN3_LOTGI
Glutamine synthetase.
  
  
 0.425
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.