STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A9T6_LOTGIPaired domain-containing protein. (276 aa)    
Predicted Functional Partners:
V4AG74_LOTGI
Homeobox domain-containing protein.
    
 
 0.473
V4AZ98_LOTGI
Homeobox domain-containing protein.
    
 
 0.473
V4A346_LOTGI
Homeobox domain-containing protein.
      
 0.470
V4C5P1_LOTGI
Homeobox domain-containing protein.
      
 0.468
V4B2I5_LOTGI
LID domain-containing protein.
      
 0.449
V4ACL4_LOTGI
Homeobox domain-containing protein.
  
   
 0.441
V4AJ96_LOTGI
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
  
   
 0.416
V3ZW88_LOTGI
Uncharacterized protein.
   
  
 0.411
V4AHA8_LOTGI
RPA_C domain-containing protein.
      
 0.410
V4A115_LOTGI
Uncharacterized protein.
      
 0.408
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.