STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AA50_LOTGIUncharacterized protein. (224 aa)    
Predicted Functional Partners:
V4AYM7_LOTGI
Nuclear cap-binding protein subunit 2.
    
 0.825
V4A762_LOTGI
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.819
V3ZJL7_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.797
V4AG41_LOTGI
MIF4G domain-containing protein.
    
 0.796
V4BAE4_LOTGI
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.755
V4AZI7_LOTGI
RRM domain-containing protein.
   
 0.741
V4C1G2_LOTGI
Uncharacterized protein.
   
 0.733
V3ZKJ8_LOTGI
Suf domain-containing protein.
   
 0.730
V3ZE28_LOTGI
Xpo1 domain-containing protein.
    
 
 0.717
V4A923_LOTGI
Slu7 domain-containing protein.
    
 0.713
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.