STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4ABP2_LOTGIAMP-binding domain-containing protein. (623 aa)    
Predicted Functional Partners:
V4AIR3_LOTGI
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
     
 0.907
V4B8B1_LOTGI
Carrier domain-containing protein.
    
 0.905
V4ATB2_LOTGI
Uncharacterized protein.
     
 0.821
V3ZJJ3_LOTGI
Hydrolase_4 domain-containing protein.
    
 0.814
V4CR53_LOTGI
AMP-binding domain-containing protein.
  
0.779
V3ZIP1_LOTGI
AMP-binding domain-containing protein.
  
  
 
0.671
V4B6E5_LOTGI
AMP-binding domain-containing protein.
  
  
 
0.665
V3ZNN7_LOTGI
AMP-binding domain-containing protein.
  
  
 
0.662
V4AIU1_LOTGI
AMP-binding domain-containing protein.
  
  
 
0.659
V4C769_LOTGI
PNPLA domain-containing protein.
   
 
 0.624
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.