V4AC62_LOTGI protein (Lottia gigantea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

V4AC62_LOTGI

Uncharacterized protein. (223 aa)

Predicted Functional Partners:

V4AVC2_LOTGI

0.980

V3ZVA8_LOTGI

0.967

V4B319_LOTGI

0.964

V3ZX92_LOTGI

0.952

V4AGY7_LOTGI

0.951

V4A866_LOTGI

0.914

V4AKP7_LOTGI

0.905

V4A053_LOTGI

0.884

V4AT37_LOTGI

0.884

V4AYJ4_LOTGI

0.883

Your Current Organism:

Lottia gigantea

NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V3ZVA8_LOTGI	V3ZX92_LOTGI	V3ZVA8	V3ZX92	Nuclear pore protein.	Uncharacterized protein.	0.999
V3ZVA8_LOTGI	V4A053_LOTGI	V3ZVA8	V4A053	Nuclear pore protein.	Uncharacterized protein.	0.988
V3ZVA8_LOTGI	V4A866_LOTGI	V3ZVA8	V4A866	Nuclear pore protein.	Uncharacterized protein.	0.997
V3ZVA8_LOTGI	V4AC62_LOTGI	V3ZVA8	V4AC62	Nuclear pore protein.	Uncharacterized protein.	0.967
V3ZVA8_LOTGI	V4AGY7_LOTGI	V3ZVA8	V4AGY7	Nuclear pore protein.	SEA domain-containing protein.	0.999
V3ZVA8_LOTGI	V4AKP7_LOTGI	V3ZVA8	V4AKP7	Nuclear pore protein.	RRM Nup35-type domain-containing protein.	0.991
V3ZVA8_LOTGI	V4AT37_LOTGI	V3ZVA8	V4AT37	Nuclear pore protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.997
V3ZVA8_LOTGI	V4AVC2_LOTGI	V3ZVA8	V4AVC2	Nuclear pore protein.	Uncharacterized protein.	0.999
V3ZVA8_LOTGI	V4AYJ4_LOTGI	V3ZVA8	V4AYJ4	Nuclear pore protein.	WD_REPEATS_REGION domain-containing protein.	0.975
V3ZVA8_LOTGI	V4B319_LOTGI	V3ZVA8	V4B319	Nuclear pore protein.	Uncharacterized protein.	0.999
V3ZX92_LOTGI	V3ZVA8_LOTGI	V3ZX92	V3ZVA8	Uncharacterized protein.	Nuclear pore protein.	0.999
V3ZX92_LOTGI	V4A053_LOTGI	V3ZX92	V4A053	Uncharacterized protein.	Uncharacterized protein.	0.953
V3ZX92_LOTGI	V4A866_LOTGI	V3ZX92	V4A866	Uncharacterized protein.	Uncharacterized protein.	0.998
V3ZX92_LOTGI	V4AC62_LOTGI	V3ZX92	V4AC62	Uncharacterized protein.	Uncharacterized protein.	0.952
V3ZX92_LOTGI	V4AKP7_LOTGI	V3ZX92	V4AKP7	Uncharacterized protein.	RRM Nup35-type domain-containing protein.	0.981
V3ZX92_LOTGI	V4AT37_LOTGI	V3ZX92	V4AT37	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
V3ZX92_LOTGI	V4AVC2_LOTGI	V3ZX92	V4AVC2	Uncharacterized protein.	Uncharacterized protein.	0.999
V3ZX92_LOTGI	V4AYJ4_LOTGI	V3ZX92	V4AYJ4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.975
V3ZX92_LOTGI	V4B319_LOTGI	V3ZX92	V4B319	Uncharacterized protein.	Uncharacterized protein.	0.993
V4A053_LOTGI	V3ZVA8_LOTGI	V4A053	V3ZVA8	Uncharacterized protein.	Nuclear pore protein.	0.988