STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AEA1_LOTGIUncharacterized protein. (196 aa)    
Predicted Functional Partners:
V3ZYD5_LOTGI
Uncharacterized protein.
   
 0.711
V4BFG0_LOTGI
ERCC4 domain-containing protein.
   
 0.711
V3ZZV8_LOTGI
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 
 0.596
V4A380_LOTGI
3'-5' exonuclease domain-containing protein.
  
 
 0.596
V4B097_LOTGI
UvrD-like helicase C-terminal domain-containing protein.
   
 
 0.563
V4C4L0_LOTGI
ERCC4 domain-containing protein.
   
 0.552
V4CQ04_LOTGI
Uncharacterized protein; Belongs to the actin family.
    
 0.551
V4AST5_LOTGI
Rad51 domain-containing protein.
  
 
 0.550
V4C882_LOTGI
RECA_2 domain-containing protein.
  
 
 0.550
V4AYE4_LOTGI
RuvB-like helicase; Belongs to the RuvB family.
    
 0.549
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.